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About p53 / Material & Methods 

Material & Methods

+ DNA isolation from:

  • biopsy samples (fresh frozen or paraffin embedded)
  • fresh frozen tumor tissue (and corresponding normal tissue)
  • peripheral blood
  • mono nuclear cells (MNC)
  • paraffin embedded tissue (stored for 10ys and more)
  • cultivated cells/ cell lines

+ RNA isolation from:

  • fresh frozen tumor tissue (and corresponding normal tissue)
  • mono nuclear cells
  

+ Polymerase chain reaction (PCR)

 

+ Mutant allele specific amplification  (MASA)

 

+ Reverse Transcription (RT)

 

+ Real-time Quantitative - PCR

   (ABI Prism 5700 Sequence Detection System)

 

+ Restriction fragment length polymorphism -  Analysis (RFLP)

 

+ Blotting:

  • Western Blot
  • Northern Blot
  • Southern Blot

+ Mutation scanning by sequencing:  

  • radiolabeled (33P) terminator cycle sequencing
  • ABI Prism ® 310 Genetic Analyzer

+ Immunohistochemistry (in cooperation with pathology) of:

  • -p53
  • -HER2/NEU
  • BCL2
  • MDM2 

+ Apoptosis detection:

  • TUNEL assay

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